Schöffelen 2019 (MOUS)#
pnpl.datasets.Schoffelen2019 wraps the “Mother of Unification
Studies” (MOUS) sentence-comprehension MEG dataset (Schöffelen et al.,
2019) released on the Radboud Data Repository
(DSC_3011020.09_236_v1).
~200 participants, two cohorts:
subjects with the
A*prefix performed the auditory tasksubjects with the
V*prefix performed the visual (reading) task
every participant performed a shared rest block
CTF MEG, raw
.dsdirectories~2 GB raw CTF per task
Warning
MOUS is not open access. You need an approved data-sharing agreement with the dataset owner before you can download.
Auth#
export RADBOUD_USERNAME="you@orcid.org"
export RADBOUD_PASSWORD="..."
Quickstart#
from pnpl.datasets import Schoffelen2019
from pnpl.tasks.schoffelen2019 import TrialEpoching
ds = Schoffelen2019(
data_path="./data/schoffelen",
task=TrialEpoching(tmin=0.0, tmax=1.0, label_type="trigger"),
include_subjects=["A2002"],
include_tasks=["auditory"],
preprocessing="notch+bp+ds",
download=True,
standardize=True,
)
x, y = ds[0]
print(x.shape, y.item())
A good starting point is a single A* (or V*) subject with the
rest task — rest is smaller and needs no stimulus alignment.
Layout differences from the other datasets#
MOUS doesn’t have a session axis. The BIDS layout is
sub-XXXX/meg/sub-XXXX_task-{auditory,visual,rest}_meg.ds, so the
loader synthesizes a constant session = "01" for the standard
(subject, session, task, run) 4-tuple convention. It also auto-skips
tasks the subject didn’t perform (auditory for V*, visual for
A*).
BIDS axes#
Axis |
Values |
|---|---|
|
|
|
always |
|
|
|
always |
Selected arguments#
task— currentlypnpl.tasks.schoffelen2019.TrialEpoching.preprocessing,preprocessing_config— see Preprocessing.include_subjects,include_tasks,include_run_keys(and theirexclude_*counterparts).standardize,clipping_boundary,channel_means,channel_stds.create_h5_if_missing,preload_h5.
Available tasks#
TrialEpoching(tmin, tmax, label_type) epochs around each trial onset
(rows whose type is "trial" in events.tsv).
label_type="trigger"(default) — label each trial with the firstUPPT001trigger code that appears inside it.label_type="binary"— constant label of1(useful for self-supervised windowing without conditional labels).